hts-specs-md

This is an unofficial project by cmdcolin to convert the hts-specs specifications from their original LaTeX/PDF formats into Markdown for easier reading and linking in the browser. Each section heading has a clickable anchor link, making it easy to share direct links to specific parts of any specification.

For the official specifications, please visit the samtools/hts-specs project.

SAM/BAM and related specifications

Variant calling data files

Discrete genomic feature data files

File encryption